Databrowser - Heatmaps

Heatmap representation of the screen plate. Access additional heatmaps through the NEXT/BACK links at the bottom of the page. Three measurements from the NeuriteQuant analysis are represented by the three principal colors red, green and blue. Each position of the screen plate is shown as a cluster of colored spots representing the individual images analyzed per position. The raw image data and the image processing reports are immediately accessible by clicking on any cluster in the heatmap representation. This particular heatmap uses the following color coding:

red: neurites per cell MAP2

red: neurites per cell TUJ1

green: branches per neuritelength TUJ1

blue: mean intensity TUJ1

This map provides similar data compared to the previous map. Here, the general neurite marker TUJ1 is used to access neurite branch density. Compared to dendritic branch density measured via MAP2, TUJ1-based measurements of general neurite branch density show stronger effects at lower nocodazole or actinomycin D concentrations.

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